Computational Genomics / Spring 2023

Announcements

  • New Lecture is up: Quantification of expression via RNA-seq [slides]
  • New Assignment released: [Homework 3]
  • New Lecture is up: Large Scale Sequence Search (Part 2) [slides]
  • New Lecture is up: Large Scale Sequence Search (Part 1) [slides]
  • New Lecture is up: Spectrum Preserving Tilings [slides]
  • New Lecture is up: Indexing the colored compacted de Bruijn Graph [slides]
  • New Lecture is up: Building the compacted colored de Bruijn Graph [slides]

Course Description

This course will focus on algorithmic, and computational aspects of biological data analysis, and specifically on genomics.

Register to our Piazza page to get announcements via e-mail.


Course instructor

Rob Patro

Teaching Assistant

Peyman Jabbarzade